Mgr. Ľudovít Ďureje Ph.D.

Position post-doc
Direction evolutionary biology, population genetics

+420 568 627 950
+420 723371995

Research interests

  • evolutionary biology,
  • spatial genetics,
  • population genetics,
  • bioinformatics,
  • hybrid zones.

Education

  • 1990: BSc Ord Computer Science (non graduating) – The University of Edinburgh.
  • 1991: BSc Hons (Zoology) – The University of Edinburgh, (class medallist).
  • 1995: Ph.D. – The University of Edinburgh, Population genetics.
  • 2005-present: Chargé de Recherche (première class) INRA, Paris (Med ed disponibilité 2008).

Employment

  • 2012-present: Institute of Vertebrate Biology, Academy of Sciences of the Czech Republic, Department of Population Biology Studenec – researcher.
  • 2012-present: University of Antwerpen, Belgium – affiliate researcher.
  • 2008-present: Universidade do Porto, Portugal – Associate Professor.
  • 2003-2008: Chargé de Recherche (1st class), INRA. CBGP Montpellier, France.
  • 2001-2003: Museum of Vertebrate Zoology, University of California, Berkeley, USA – associate research.
  • 1999-2001: University of Queensland, Australia – ARC associate research.
  • 1999-1999: Université de Montpellier II, France – CNRS visiting fellowship.
  • 1997-1999: University of Indiana, USA – NSF Postdoctoral fellowship.
  • 1995-1996: The University of Edinburgh, UK – NERC Post-Doctoral Research Assistant.
  • 1995-1995: Université de Montpellier II, France – ESF Short Visiting Fellowship.

Recent Invited Contribution

  • March-April 2012: Frontiers of Speciation (FroSpects) summer school, European Science Foundation (ESF), Pruhonice, Czech Republic.
  • March-April 2012: Programming for Evolutionary Biology Workshop, funding: VolkswagenStiftung, Leipzig, Germany.
  • January 2011: International Conference of Landscape Genetics, plenary: Spatial Coalescent Methods and Phylogeography, Bialowieza, Poland.
  • January 2010: International Biogeography Society (IBS) Conference, talk: Spatial Coalescent Methods and Phylogeography, Heraklion, Crete, Greece.
  • October 2010: European Science Foundation (ESF) Frontiers of Speciation (FroSpects) one-day symposium, Prague, Czech Republic.
  • January 2010: Marie Curie Initial Training Network: Speciation. Workshop: Genetics and Genomics of Speciation, Losehill Hall, UK.
  • May 2009: Swedish Environmental Protection Agency (Naturvårdsverket): Conservation genetics workshop – Stockholm, Sweden.
  • 2008: ESF Conservation genetics summer school – Liblice, Czech Republic.
  • 2008: ARC workshop Modelling cane toad invasion dynamics – TERF, NT, Australia.
  • 2007: ARC Research Network: Understanding recent evolutionary history of Australian Biota: Phylogeography and Coalescence Workshop – Museum Victoria, Melbourne, Australia.
  • 2007: DNA Sampling workshop – Design of geographic sampling strategies – Musée de l’Homme, Paris, France.

Academic service

  • reviewer – Evolution, Journal of Evolutionary Biology, Heredity, Current Biology, Molecular Ecology, Molecular Ecology Resources, BMC Evolutionary Biology, Bioinformatics, Conservation Genetics, Ecology and Evolution, Avian Biology.

Publications

2024

Bendová B, Vošlajerová Bímová B, Čížková D, Daniszová K, Ďureje Ľ, Hiadlovská Z, Macholán M, Piálek J, Schmiedová L, Kreisinger J (2024). The strength of gut microbiota transfer along social networks and genealogical lineages in the house mouse. FEMS Microbiology Ecology, 100: fiae075.
Čížková D, Payne P, Bryjová A, Ďureje Ľ, Piálek J, Kreisinger J (2024). Convergence of gut phage communities but not bacterial communities following wild mouse bacteriophage transplantation into captive house mice. The ISME Journal, 18: wrae178.
Jarquín-Díaz VH, Ferreira SCM, Balard A, Ďureje Ľ, Macholán M, Piálek J, Bengtsson-Palme J, Kramer-Schadt S, Forslund-Startceva SK, Heitlinger E (2024). Aberrant microbiomes are associated with increased antibiotic resistance gene load in hybrid mice. ISME Communications, 4: ycae053.
Jost J, Hirzmann J, Ďureje Ľ, Maaz D, Martin P, Stach T, Heitlinger E, Jarquín-Díaz VH (2024). Dentition patterns and molecular diversity of Mastophorus muris (Gmelin, 1790) (Nematoda: Spiruroidea) support a host-associated subdivision. Parasitology Research, 123: 237.
Macholán M, Baird SJE, Fornůsková A, Ďureje Ľ, Burgstaller JP, Goüy de Bellocq J, Heitlinger E, Klusáčková P, Koshev Y, Piálek J (2024). A reappraisal of mitochondrial DNA introgression in the Mus musculus musculus/Mus musculus domesticus hybrid zone suggests ancient North-European associations between mice and humans. Zoological Journal of the Linnean Society, 202: zlae110.

2023

Goüy de Bellocq J, Fornůsková A, Ďureje Ľ, Bartáková V, Daniszová K, Dianat M, Janča M, Šabata P, Šeneklová N, Stodůlka T, Vošlajerová Bímová B, Macholán M (2023). First record of the greater white-toothed shrew, Crocidura russula, in the Czech Republic. Journal of Vertebrate Biology, 72: 23047.

2022

Bendová B, Mikula O, Vošlajerová Bímová B, Čížková D, Daniszová K, Ďureje Ľ, Hiadlovská Z, Macholán M, Martin J, Piálek J, Schmiedová L, Kreisinger J (2022). Divergent gut microbiota in two closely related house mouse subspecies under common garden conditions. FEMS Microbiology Ecology, 98: fiac078.
Mikula O, Macholán M, Ďureje Ľ, Hiadlovská Z, Daniszová K, Janotová K, Vošlajerová Bímová B (2022). House mouse subspecies do differ in their social structure. Ecology and Evolution, 12: e9683.

2021

Čížková D, Ďureje Ľ, Piálek J, Kreisinger J (2021). Experimental validation of small mammal gut microbiota sampling from faeces and from the caecum after death. Heredity, 127: 141-150.

2020

Balard A, Jarquín-Díaz VH, Jost J, Mittné V, Böhning F, Ďureje Ľ, Piálek J, Heitlinger E (2020). Coupling between tolerance and resistance for two related Eimeria parasite species. Ecology and Evolution, 10: 13938-13948.
Balard A, Jarquín-Díaz VH, Jost J, Martincová I, Ďureje Ľ, Piálek J, Macholán M, Goüy de Bellocq J, Baird SJE, Heitlinger E (2020). Intensity of infection with intracellular Eimeria spp. and pinworms is reduced in hybrid mice compared to parental subspecies. Journal of Evolutionary Biology, 33: 435-448.
Bendová B, Piálek J, Ďureje Ľ, Schmiedová L, Čížková D, Martin J, Kreisinger J (2020). How being synanthropic affects the gut bacteriome and mycobiome: comparison of two mouse species with contrasting ecologies. BMC Microbiology, 20: s12866.
Fevola C, Rossi C, Rosso F, Girardi M, Rosà R, Manica M, Delucchi L, Rocchini D, Garzon-Lopez CX, Arnoldi D, Bianchi A, Buzan E, Charbonnel N, Collini M, Ďureje Ľ, Ecke F, Ferrari N, Fischer S, Gillingham EL, Hörnfeldt B, Kazimírová M, Konečný A, Maas M, Magnusson M, Miller A, Niemimaa J, Nordström A, Obiegala A, Olsson GE, Pedrini P, Piálek J, Reusken CB, Rizzolli F, Romeo C, Silaghi C, Sironen T, Stanko M, Tagliapietra V, Ulrich RG, Vapalahti O, Voutilainen L, Wauters LA, Rizzoli A, Vaheri A, Jääskeläinen AJ, Henttonen H, Hauffe HC (2020). Geographical distribution of Ljungan virus in small mammals in Europe. Vector-Borne and Zoonotic Diseases, 20: 692-702.
Vošlajerová Bímová B, Macholán M, Ďureje Ľ, Berchová Bímová K, Martincová I, Piálek J (2020). Sperm quality, aggressiveness and generation turnover may facilitate unidirectional Y chromosome introgression across the European house mouse hybrid zone. Heredity, 124: 200-211.

2019

Martincová I, Ďureje Ľ, Kreisinger J, Macholán M, Piálek J (2019). Phenotypic effects of the Y chromosome are variable and structured in hybrids among house mouse recombinant lines. Ecology and Evolution, 9: 6124-6137.

2018

Čížková D, Baird SJE, Těšíková J, Voigt S, Ďureje Ľ, Piálek J, Goüy de Bellocq J (2018). Host subspecific viral strains in European house mice: Murine cytomegalovirus in the Eastern (Mus musculus musculus) and Western house mouse (Mus musculus domesticus). Virology, 521: 92-98.

2014

Albrechtová J, Albrecht T, Ďureje Ľ, Pallazola VA, Piálek J (2014). Sperm morphology in two house mouse subspecies: Do wild-derived strains and wild mice tell the same story?. PLoS ONE, 9: e115669.

2012

Ďureje Ľ, Macholán M, Baird SJE, Piálek J (2012). The mouse hybrid zone in Central Europe: from morphology to molecules. Folia zoologica, 61: 308-318.

2011

Ďureje Ľ, Vošlajerová Bímová B, Piálek J (2011). No postnatal maternal effect on male aggressiveness in wild-derived strains of house mice. Aggressive Behavior, 37: 48-55.

2008

Piálek J, Vyskočilová M, Bímová B, Havelková D, Piálková J, Dufková P, Bencová V, Ďureje Ľ, Albrecht T, Hauffe HC, Macholán M, Munclinger P, Štorchová R, Zajícová A, Holáň V, Gregorová S, Forejt J (2008). Development of unique house mouse resources suitable for evolutionary studies of speciation. Journal of Heredity, 99: 34-44.